RiskAssessment
An assessment of the likely outcome(s) for a patient or other subject as well as the likelihood of each outcome.
Columns
Header row
# |
path |
type |
required |
description |
0 |
resourceType |
string |
* |
Resource type identifier. Must be string "RiskAssessment" |
1 |
|
integer |
* |
Number of subrows |
2 |
id |
string |
* |
Logical id of this artifact |
|
basedOn |
Reference |
|
Request fulfilled by this assessment |
3 |
basedOn.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
4 |
basedOn.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
basedOn.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
5 |
basedOn.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
basedOn.identifier.type |
CodeableConcept |
|
Description of identifier |
|
basedOn.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
6 |
basedOn.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
7 |
basedOn.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
8 |
basedOn.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
9 |
basedOn.identifier.type.coding.display |
string |
|
Representation defined by the system |
10 |
basedOn.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
11 |
basedOn.identifier.type.text |
string |
|
Plain text representation of the concept |
12 |
basedOn.identifier.system |
uri |
|
The namespace for the identifier value |
13 |
basedOn.identifier.value |
string |
|
The value that is unique |
|
basedOn.identifier.period |
Period |
|
Time period when id is/was valid for use |
14 |
basedOn.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
15 |
basedOn.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
16 |
basedOn.display |
string |
|
Text alternative for the resource |
|
parent |
Reference |
|
Part of this occurrence |
17 |
parent.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
18 |
parent.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
parent.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
19 |
parent.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
parent.identifier.type |
CodeableConcept |
|
Description of identifier |
|
parent.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
20 |
parent.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
21 |
parent.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
22 |
parent.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
23 |
parent.identifier.type.coding.display |
string |
|
Representation defined by the system |
24 |
parent.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
25 |
parent.identifier.type.text |
string |
|
Plain text representation of the concept |
26 |
parent.identifier.system |
uri |
|
The namespace for the identifier value |
27 |
parent.identifier.value |
string |
|
The value that is unique |
|
parent.identifier.period |
Period |
|
Time period when id is/was valid for use |
28 |
parent.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
29 |
parent.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
30 |
parent.display |
string |
|
Text alternative for the resource |
31 |
status |
code |
|
registered | preliminary | final | amended + |
|
method |
CodeableConcept |
|
Evaluation mechanism |
|
method.coding |
Coding |
|
Code defined by a terminology system |
32 |
method.coding.system |
uri |
|
Identity of the terminology system |
33 |
method.coding.version |
string |
|
Version of the system - if relevant |
34 |
method.coding.code |
code |
|
Symbol in syntax defined by the system |
35 |
method.coding.display |
string |
|
Representation defined by the system |
36 |
method.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
37 |
method.text |
string |
|
Plain text representation of the concept |
|
code |
CodeableConcept |
|
Type of assessment |
|
code.coding |
Coding |
|
Code defined by a terminology system |
38 |
code.coding.system |
uri |
|
Identity of the terminology system |
39 |
code.coding.version |
string |
|
Version of the system - if relevant |
40 |
code.coding.code |
code |
|
Symbol in syntax defined by the system |
41 |
code.coding.display |
string |
|
Representation defined by the system |
42 |
code.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
43 |
code.text |
string |
|
Plain text representation of the concept |
|
subject |
Reference |
|
Who/what does assessment apply to? |
44 |
subject.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
45 |
subject.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
subject.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
46 |
subject.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
subject.identifier.type |
CodeableConcept |
|
Description of identifier |
|
subject.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
47 |
subject.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
48 |
subject.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
49 |
subject.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
50 |
subject.identifier.type.coding.display |
string |
|
Representation defined by the system |
51 |
subject.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
52 |
subject.identifier.type.text |
string |
|
Plain text representation of the concept |
53 |
subject.identifier.system |
uri |
|
The namespace for the identifier value |
54 |
subject.identifier.value |
string |
|
The value that is unique |
|
subject.identifier.period |
Period |
|
Time period when id is/was valid for use |
55 |
subject.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
56 |
subject.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
57 |
subject.display |
string |
|
Text alternative for the resource |
|
encounter |
Reference |
|
Where was assessment performed? |
58 |
encounter.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
59 |
encounter.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
encounter.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
60 |
encounter.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
encounter.identifier.type |
CodeableConcept |
|
Description of identifier |
|
encounter.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
61 |
encounter.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
62 |
encounter.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
63 |
encounter.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
64 |
encounter.identifier.type.coding.display |
string |
|
Representation defined by the system |
65 |
encounter.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
66 |
encounter.identifier.type.text |
string |
|
Plain text representation of the concept |
67 |
encounter.identifier.system |
uri |
|
The namespace for the identifier value |
68 |
encounter.identifier.value |
string |
|
The value that is unique |
|
encounter.identifier.period |
Period |
|
Time period when id is/was valid for use |
69 |
encounter.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
70 |
encounter.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
71 |
encounter.display |
string |
|
Text alternative for the resource |
|
occurrence[x] |
|
|
When was assessment made? |
72 |
occurrenceDateTime |
dateTime |
|
|
|
occurrencePeriod |
Period |
|
|
73 |
occurrencePeriod.start |
dateTime |
|
Starting time with inclusive boundary |
74 |
occurrencePeriod.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
|
condition |
Reference |
|
Condition assessed |
75 |
condition.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
76 |
condition.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
condition.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
77 |
condition.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
condition.identifier.type |
CodeableConcept |
|
Description of identifier |
|
condition.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
78 |
condition.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
79 |
condition.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
80 |
condition.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
81 |
condition.identifier.type.coding.display |
string |
|
Representation defined by the system |
82 |
condition.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
83 |
condition.identifier.type.text |
string |
|
Plain text representation of the concept |
84 |
condition.identifier.system |
uri |
|
The namespace for the identifier value |
85 |
condition.identifier.value |
string |
|
The value that is unique |
|
condition.identifier.period |
Period |
|
Time period when id is/was valid for use |
86 |
condition.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
87 |
condition.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
88 |
condition.display |
string |
|
Text alternative for the resource |
|
performer |
Reference |
|
Who did assessment? |
89 |
performer.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
90 |
performer.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
performer.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
91 |
performer.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
performer.identifier.type |
CodeableConcept |
|
Description of identifier |
|
performer.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
92 |
performer.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
93 |
performer.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
94 |
performer.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
95 |
performer.identifier.type.coding.display |
string |
|
Representation defined by the system |
96 |
performer.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
97 |
performer.identifier.type.text |
string |
|
Plain text representation of the concept |
98 |
performer.identifier.system |
uri |
|
The namespace for the identifier value |
99 |
performer.identifier.value |
string |
|
The value that is unique |
|
performer.identifier.period |
Period |
|
Time period when id is/was valid for use |
100 |
performer.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
101 |
performer.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
102 |
performer.display |
string |
|
Text alternative for the resource |
103 |
mitigation |
string |
|
How to reduce risk |
Row identifier
# |
path |
type |
required |
description |
0 |
|
string |
* |
Subrow identifier. Must be string "identifier" |
|
identifier |
Identifier |
|
Unique identifier for the assessment |
1 |
identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
identifier.type |
CodeableConcept |
|
Description of identifier |
|
identifier.type.coding |
Coding |
|
Code defined by a terminology system |
2 |
identifier.type.coding.system |
uri |
|
Identity of the terminology system |
3 |
identifier.type.coding.version |
string |
|
Version of the system - if relevant |
4 |
identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
5 |
identifier.type.coding.display |
string |
|
Representation defined by the system |
6 |
identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
7 |
identifier.type.text |
string |
|
Plain text representation of the concept |
8 |
identifier.system |
uri |
|
The namespace for the identifier value |
9 |
identifier.value |
string |
|
The value that is unique |
|
identifier.period |
Period |
|
Time period when id is/was valid for use |
10 |
identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
11 |
identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
Row reasonCode
# |
path |
type |
required |
description |
0 |
|
string |
* |
Subrow identifier. Must be string "reasonCode" |
|
reasonCode |
CodeableConcept |
|
Why the assessment was necessary? |
|
reasonCode.coding |
Coding |
|
Code defined by a terminology system |
1 |
reasonCode.coding.system |
uri |
|
Identity of the terminology system |
2 |
reasonCode.coding.version |
string |
|
Version of the system - if relevant |
3 |
reasonCode.coding.code |
code |
|
Symbol in syntax defined by the system |
4 |
reasonCode.coding.display |
string |
|
Representation defined by the system |
5 |
reasonCode.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
6 |
reasonCode.text |
string |
|
Plain text representation of the concept |
Row reasonReference
# |
path |
type |
required |
description |
0 |
|
string |
* |
Subrow identifier. Must be string "reasonReference" |
|
reasonReference |
Reference |
|
Why the assessment was necessary? |
1 |
reasonReference.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
2 |
reasonReference.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
reasonReference.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
3 |
reasonReference.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
reasonReference.identifier.type |
CodeableConcept |
|
Description of identifier |
|
reasonReference.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
4 |
reasonReference.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
5 |
reasonReference.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
6 |
reasonReference.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
7 |
reasonReference.identifier.type.coding.display |
string |
|
Representation defined by the system |
8 |
reasonReference.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
9 |
reasonReference.identifier.type.text |
string |
|
Plain text representation of the concept |
10 |
reasonReference.identifier.system |
uri |
|
The namespace for the identifier value |
11 |
reasonReference.identifier.value |
string |
|
The value that is unique |
|
reasonReference.identifier.period |
Period |
|
Time period when id is/was valid for use |
12 |
reasonReference.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
13 |
reasonReference.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
14 |
reasonReference.display |
string |
|
Text alternative for the resource |
Row basis
# |
path |
type |
required |
description |
0 |
|
string |
* |
Subrow identifier. Must be string "basis" |
|
basis |
Reference |
|
Information used in assessment |
1 |
basis.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
2 |
basis.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
basis.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
3 |
basis.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
basis.identifier.type |
CodeableConcept |
|
Description of identifier |
|
basis.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
4 |
basis.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
5 |
basis.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
6 |
basis.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
7 |
basis.identifier.type.coding.display |
string |
|
Representation defined by the system |
8 |
basis.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
9 |
basis.identifier.type.text |
string |
|
Plain text representation of the concept |
10 |
basis.identifier.system |
uri |
|
The namespace for the identifier value |
11 |
basis.identifier.value |
string |
|
The value that is unique |
|
basis.identifier.period |
Period |
|
Time period when id is/was valid for use |
12 |
basis.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
13 |
basis.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
14 |
basis.display |
string |
|
Text alternative for the resource |
Row prediction
# |
path |
type |
required |
description |
0 |
|
string |
* |
Subrow identifier. Must be string "prediction" |
|
prediction |
|
|
Outcome predicted |
|
prediction.outcome |
CodeableConcept |
|
Possible outcome for the subject |
|
prediction.outcome.coding |
Coding |
|
Code defined by a terminology system |
1 |
prediction.outcome.coding.system |
uri |
|
Identity of the terminology system |
2 |
prediction.outcome.coding.version |
string |
|
Version of the system - if relevant |
3 |
prediction.outcome.coding.code |
code |
|
Symbol in syntax defined by the system |
4 |
prediction.outcome.coding.display |
string |
|
Representation defined by the system |
5 |
prediction.outcome.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
6 |
prediction.outcome.text |
string |
|
Plain text representation of the concept |
|
prediction.probability[x] |
|
|
Likelihood of specified outcome |
7 |
prediction.probabilityDecimal |
decimal |
|
|
|
prediction.probabilityRange |
Range |
|
|
|
prediction.probabilityRange.low |
Quantity |
|
Low limit |
8 |
prediction.probabilityRange.low.value |
decimal |
|
Numerical value (with implicit precision) |
9 |
prediction.probabilityRange.low.unit |
string |
|
Unit representation |
10 |
prediction.probabilityRange.low.system |
uri |
|
System that defines coded unit form |
11 |
prediction.probabilityRange.low.code |
code |
|
Coded form of the unit |
|
prediction.probabilityRange.high |
Quantity |
|
High limit |
12 |
prediction.probabilityRange.high.value |
decimal |
|
Numerical value (with implicit precision) |
13 |
prediction.probabilityRange.high.unit |
string |
|
Unit representation |
14 |
prediction.probabilityRange.high.system |
uri |
|
System that defines coded unit form |
15 |
prediction.probabilityRange.high.code |
code |
|
Coded form of the unit |
|
prediction.qualitativeRisk |
CodeableConcept |
|
Likelihood of specified outcome as a qualitative value |
|
prediction.qualitativeRisk.coding |
Coding |
|
Code defined by a terminology system |
16 |
prediction.qualitativeRisk.coding.system |
uri |
|
Identity of the terminology system |
17 |
prediction.qualitativeRisk.coding.version |
string |
|
Version of the system - if relevant |
18 |
prediction.qualitativeRisk.coding.code |
code |
|
Symbol in syntax defined by the system |
19 |
prediction.qualitativeRisk.coding.display |
string |
|
Representation defined by the system |
20 |
prediction.qualitativeRisk.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
21 |
prediction.qualitativeRisk.text |
string |
|
Plain text representation of the concept |
22 |
prediction.relativeRisk |
decimal |
|
Relative likelihood |
|
prediction.when[x] |
|
|
Timeframe or age range |
|
prediction.whenPeriod |
Period |
|
|
23 |
prediction.whenPeriod.start |
dateTime |
|
Starting time with inclusive boundary |
24 |
prediction.whenPeriod.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
|
prediction.whenRange |
Range |
|
|
|
prediction.whenRange.low |
Quantity |
|
Low limit |
25 |
prediction.whenRange.low.value |
decimal |
|
Numerical value (with implicit precision) |
26 |
prediction.whenRange.low.unit |
string |
|
Unit representation |
27 |
prediction.whenRange.low.system |
uri |
|
System that defines coded unit form |
28 |
prediction.whenRange.low.code |
code |
|
Coded form of the unit |
|
prediction.whenRange.high |
Quantity |
|
High limit |
29 |
prediction.whenRange.high.value |
decimal |
|
Numerical value (with implicit precision) |
30 |
prediction.whenRange.high.unit |
string |
|
Unit representation |
31 |
prediction.whenRange.high.system |
uri |
|
System that defines coded unit form |
32 |
prediction.whenRange.high.code |
code |
|
Coded form of the unit |
33 |
prediction.rationale |
string |
|
Explanation of prediction |
Row note
# |
path |
type |
required |
description |
0 |
|
string |
* |
Subrow identifier. Must be string "note" |
|
note |
Annotation |
|
Comments on the risk assessment |
|
note.author[x] |
|
|
Individual responsible for the annotation |
|
note.authorReference |
Reference |
|
|
1 |
note.authorReference.reference |
string |
|
Literal reference, Relative, internal or absolute URL |
2 |
note.authorReference.type |
uri |
|
Type the reference refers to (e.g. "Patient") |
|
note.authorReference.identifier |
Identifier |
|
Logical reference, when literal reference is not known |
3 |
note.authorReference.identifier.use |
code |
|
usual | official | temp | secondary | old (If known) |
|
note.authorReference.identifier.type |
CodeableConcept |
|
Description of identifier |
|
note.authorReference.identifier.type.coding |
Coding |
|
Code defined by a terminology system |
4 |
note.authorReference.identifier.type.coding.system |
uri |
|
Identity of the terminology system |
5 |
note.authorReference.identifier.type.coding.version |
string |
|
Version of the system - if relevant |
6 |
note.authorReference.identifier.type.coding.code |
code |
|
Symbol in syntax defined by the system |
7 |
note.authorReference.identifier.type.coding.display |
string |
|
Representation defined by the system |
8 |
note.authorReference.identifier.type.coding.userSelected |
boolean |
|
If this coding was chosen directly by the user |
9 |
note.authorReference.identifier.type.text |
string |
|
Plain text representation of the concept |
10 |
note.authorReference.identifier.system |
uri |
|
The namespace for the identifier value |
11 |
note.authorReference.identifier.value |
string |
|
The value that is unique |
|
note.authorReference.identifier.period |
Period |
|
Time period when id is/was valid for use |
12 |
note.authorReference.identifier.period.start |
dateTime |
|
Starting time with inclusive boundary |
13 |
note.authorReference.identifier.period.end |
dateTime |
|
End time with inclusive boundary, if not ongoing |
14 |
note.authorReference.display |
string |
|
Text alternative for the resource |
15 |
note.authorString |
string |
|
|
16 |
note.time |
dateTime |
|
When the annotation was made |
17 |
note.text |
markdown |
|
The annotation - text content (as markdown) |
Examples
Example #1
Input CSV
RiskAssessment,4,"breastcancer-risk",,,,,,,,,,,,,,,,,,,,,,,,,,,,,"final",,,,,,,"http://browser.ihtsdotools.org/",,"709510001","Assessment of risk for disease (procedure)",,,"Patient/example",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"Practitioner/example",,,,,,,,,,,,,,
identifier,"official",,,,,,,"http://example.org","risk-assessment-breastcancer1",,
basis,"Observation/example-genetics-brcapat",,,,,,,,,,,,,
prediction,,,,,,"Unknown risk of developing breast cancer",,,,,,,,,,,,,,,,,,,,,,,,,,,
note,,,,,,,,,,,,,,,,,"This risk assessment is based on BRCA1 and BRCA2 genetic mutation test"
Resulting resource
{
"resourceType": "RiskAssessment",
"id": "breastcancer-risk",
"identifier": [
{
"use": "official",
"system": "http://example.org",
"value": "risk-assessment-breastcancer1"
}
],
"status": "final",
"code": {
"coding": [
{
"system": "http://browser.ihtsdotools.org/",
"code": "709510001",
"display": "Assessment of risk for disease (procedure)"
}
]
},
"subject": {
"reference": "Patient/example"
},
"performer": {
"reference": "Practitioner/example"
},
"basis": [
{
"reference": "Observation/example-genetics-brcapat"
}
],
"prediction": [
{
"outcome": {
"text": "Unknown risk of developing breast cancer"
}
}
],
"note": [
{
"text": "This risk assessment is based on BRCA1 and BRCA2 genetic mutation test"
}
]
}
Example #2
Input CSV
RiskAssessment,5,"cardiac",,,,,,,,,,,,,,,,,,,,,,,,,,,,,"final",,,,,,,,,,,,,"Patient/pat2",,,,,,,,,,,,,,"Encounter/example",,,,,,,,,,,,,,"2014-07-19T16:04:00Z",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"http://cvdrisk.nhlbi.nih.gov/#cholesterol",
identifier,"official",,,,,,,"http://example.org","risk-assessment-cardiac",,
basis,"Patient/pat2",,,,,,,,,,,,,
basis,"DiagnosticReport/lipids",,,,,,,,,,,,,
basis,"Observation/blood-pressure",,,,,,,,,,,,,
prediction,,,,,,"Heart Attack",0.02,,,,,,,,,,,,,,,,,,39,"years","http://unitsofmeasure.org","a",49,"years","http://unitsofmeasure.org","a",
Resulting resource
{
"resourceType": "RiskAssessment",
"id": "cardiac",
"identifier": [
{
"use": "official",
"system": "http://example.org",
"value": "risk-assessment-cardiac"
}
],
"status": "final",
"subject": {
"reference": "Patient/pat2"
},
"encounter": {
"reference": "Encounter/example"
},
"occurrenceDateTime": "2014-07-19T16:04:00Z",
"performer": {
"display": "http://cvdrisk.nhlbi.nih.gov/#cholesterol"
},
"basis": [
{
"reference": "Patient/pat2"
},
{
"reference": "DiagnosticReport/lipids"
},
{
"reference": "Observation/blood-pressure"
}
],
"prediction": [
{
"outcome": {
"text": "Heart Attack"
},
"probabilityDecimal": 0.02,
"whenRange": {
"low": {
"value": 39,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 49,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
}
]
}
Example #3
Input CSV
RiskAssessment,10,"genetic",,,,,,,,,,,,,,,,,,,,,,,,,,,,,"final",,,"BRCAPRO",,,,,,,,,,"Patient/b248b1b2-1686-4b94-9936-37d7a5f94b51",,,,,,,,,,,,,,,,,,,,,,,,,,,,"2006-01-13T23:01:00Z",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
basis,"List/prognosis",,,,,,,,,,,,,
prediction,,,,,,"Breast Cancer",0.000168,,,,,,,,,,,,,,,,,,,,,,53,"years","http://unitsofmeasure.org","a",
prediction,,,,,,"Breast Cancer",0.000368,,,,,,,,,,,,,,,,,,54,"years","http://unitsofmeasure.org","a",57,"years","http://unitsofmeasure.org","a",
prediction,,,,,,"Breast Cancer",0.000594,,,,,,,,,,,,,,,,,,58,"years","http://unitsofmeasure.org","a",62,"years","http://unitsofmeasure.org","a",
prediction,,,,,,"Breast Cancer",0.000838,,,,,,,,,,,,,,,,,,63,"years","http://unitsofmeasure.org","a",67,"years","http://unitsofmeasure.org","a",
prediction,,,,,,"Breast Cancer",0.001089,,,,,,,,,,,,,,,,,,68,"years","http://unitsofmeasure.org","a",72,"years","http://unitsofmeasure.org","a",
prediction,,,,,,"Breast Cancer",0.001327,,,,,,,,,,,,,,,,,,73,"years","http://unitsofmeasure.org","a",77,"years","http://unitsofmeasure.org","a",
prediction,,,,,,"Breast Cancer",0.00153,,,,,,,,,,,,,,,,,,78,"years","http://unitsofmeasure.org","a",82,"years","http://unitsofmeasure.org","a",
prediction,,,,,,"Breast Cancer",0.001663,,,,,,,,,,,,,,,,,,83,"years","http://unitsofmeasure.org","a",88,"years","http://unitsofmeasure.org","a",
note,,,,,,,,,,,,,,,,,"High degree of certainty"
Resulting resource
{
"resourceType": "RiskAssessment",
"id": "genetic",
"status": "final",
"method": {
"coding": [
{
"code": "BRCAPRO"
}
]
},
"subject": {
"reference": "Patient/b248b1b2-1686-4b94-9936-37d7a5f94b51"
},
"occurrenceDateTime": "2006-01-13T23:01:00Z",
"basis": [
{
"reference": "List/prognosis"
}
],
"prediction": [
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.000168,
"whenRange": {
"high": {
"value": 53,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
},
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.000368,
"whenRange": {
"low": {
"value": 54,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 57,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
},
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.000594,
"whenRange": {
"low": {
"value": 58,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 62,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
},
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.000838,
"whenRange": {
"low": {
"value": 63,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 67,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
},
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.001089,
"whenRange": {
"low": {
"value": 68,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 72,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
},
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.001327,
"whenRange": {
"low": {
"value": 73,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 77,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
},
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.00153,
"whenRange": {
"low": {
"value": 78,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 82,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
},
{
"outcome": {
"text": "Breast Cancer"
},
"probabilityDecimal": 0.001663,
"whenRange": {
"low": {
"value": 83,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
},
"high": {
"value": 88,
"unit": "years",
"system": "http://unitsofmeasure.org",
"code": "a"
}
}
}
],
"note": [
{
"text": "High degree of certainty"
}
]
}
Example #4
Input CSV
RiskAssessment,0,"population",,,,,,,,,,,,,,,,,,,,,,,,,,,,,"final",,,,,,,,,,,,,"#group1",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Resulting resource
{
"resourceType": "RiskAssessment",
"id": "population",
"status": "final",
"subject": {
"reference": "#group1"
}
}
Example #5
Input CSV
RiskAssessment,1,"prognosis",,,,,,,,,,,,,,,,,,,,,,,,,,,,,"final",,,,,,,,,,,,,"Patient/example",,,,,,,,,,,,,,,,,,,,,,,,,,,,"2010-11-22",,,"Condition/stroke",,,,,,,,,,,,,"Ischemic Stroke",,,,,,,,,,,,,,,
prediction,"http://snomed.info/sct",,"249943000:363698007=72098002,260868000=6934004",,,"permanent weakness of the left arm",,,,,,,,,,"http://terminology.hl7.org/CodeSystem/risk-probability",,"moderate","moderate likelihood",,,,,,,,,,,,,,
Resulting resource
{
"resourceType": "RiskAssessment",
"id": "prognosis",
"status": "final",
"subject": {
"reference": "Patient/example"
},
"occurrenceDateTime": "2010-11-22",
"condition": {
"reference": "Condition/stroke",
"display": "Ischemic Stroke"
},
"prediction": [
{
"outcome": {
"coding": [
{
"system": "http://snomed.info/sct",
"code": "249943000:363698007=72098002,260868000=6934004"
}
],
"text": "permanent weakness of the left arm"
},
"qualitativeRisk": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/risk-probability",
"code": "moderate",
"display": "moderate likelihood"
}
]
}
}
]
}